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Category: Publications

(2024) “ATP dependence of decision-making capacity in a fine-grained model of gene regulatory networks” – article by Kumar R, Johnston IG

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(2024) “Comparing structure and dynamics of transition graphs by the symmetric difference metric over an edge-filtration” – article by Pascual BG, Salbu LM, Renz J, Giannakis K, Johnston IG

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(2024) “A hypercubic Mk model framework for capturing reversibility in disease, cancer, and evolutionary accumulation modelling” – article by Johnston IG, Diaz-Uriarte R

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(2024) “Connecting species-specific extents of genome reduction in mitochondria and plastids” – article by Giannakis K, Richards L, Dauda KA, Johnston IG

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(2025) “Co-existence of two blaNDM-5 and blaOXA-181 on distinct plasmids in a carbapenem-resistant Klebsiella pneumoniae from a tertiary hospital, Tanzania” – article by Mapunda L, Mwingwa A, Kamori D, Kumburu H, van Zwetselaar M, Blomberg B, Manyahi J

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(2024) “Antimicrobial resistance profile of Enterococcus species and molecular characterization of vancomycin-resistant Enterococcus faecium from fecal samples of newly diagnosed adult HIV patients in Dar es Salaam, Tanzania” – article by Kibwana UO, Manyahi J, Moyo SJ, Sandnes HH, Blomberg B, et al.

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(2025) “A genome-wide One Health study of Klebsiella pneumoniae in Norway reveals overlapping populations but few recent transmission events across reservoirs” – article by Hetland M, Winkler MA, Kaspersen H, Håkonsholm F, Bakksjø RJ, Bernhoff E, Delgado-Blas JF, Brisse S, Correia A, Fostervold A, Lam MMC, Lunestad BT, Marathe NP, Raffelsberger N, Samuelsen Ø, Sunde M, Sundsfjord A, Urdahl AM, Wick RR, Löhr IH, Holt KE

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(2025) “Complete genomes of 568 diverse Klebsiella pneumoniae species complex isolates from humans, animals, and marine sources in Norway from 2001–2020” – article by Hetland M, Winkler MA, Kaspersen H, Håkonsholm F, Bakksjø RJ, Bernhoff E, Delgado-Blas JF, Brisse S, Correia A, Fostervold A, Lam MMC, Lunestad BT, Marathe NP, Raffelsberger N, Samuelsen Ø, Sunde M, Sundsfjord A, Urdahl AM, Wick RR, Holt KE, Löhr IH

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(2024) “Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae” – article by Tsang KK, et al.

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(2024) “Risk of death in Klebsiella pneumoniae bloodstream infections is associated with specific phylogenetic lineages” – article by Fostervold A, Raffelsberger N, Hetland MAK, Bakksjø R, Bernhoff E, Samuelsen Ø, Sundsfjord A, Afset JE, Berntsen CF, Bævre-Jensen R, Ebbesen MH, Gammelsrud KW, Guleng AD, Handal N, Jakovljev A, Johal SK, Marvik Å, Natvik A, Sandnes RA, Tofteland S, Bjørnholt JV, Löhr IH

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